Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015917159.1_cds_XP_016466802.1_59619
CDS Infomation

[gene=LOC107789493] [db_xref=GeneID:107789493] [protein=aspartic proteinase-like protein 2] [protein_id=XP_016466802.1] [location=complement(join(34932..35077,35297..35368,37325..37400,39504..39594,41008..41081,41170..41332,43351..43575,44745..44992,45120..45249,46181..46407))] [gbkey=CDS]
Sequence

ATGGATCTGAGGAGAAAAGGGTGTTTGATATTGCTTTTGGTTTTGGTTTTGGTGGTGAAT
ATAGTAAAGGGAGATAATAATGTAGTGTTTAATGTGAAGCATAAATATGGTGGGCGTGGA
GGTTCAGTCTTGAATGAACTCAAAGCACATGATAGTCGCCGCCATGGCAGAATGCTTGCC
GCCGTTGACTTCCAATTGGGTGGCAATGGTCAACCCACTGATGCTGCGCTCTATTACACT
AAACTTACAATCGGGACTCCTCCAAAGGACTATCATGTCCAAGTAGATACTGGAAGTGAT
ATCTTATGGGTGAATTGTGCTGGCTGTAGGAGATGTCCTTCAAAAAGCAGTCTTGGGATA
GACTTGACGCTATATGACTTGAAAGCCTCAGCATCTGGGAAAACCGTTAGTTGCGACCAA
GACTTTTGCACTGATATGTTTAATGCTCCCTACTCAGATTGCAGAGTGGGAGCACCCTGT
GAATATCAGGTTACTTACGGGGACGGCAGCTCAACTTCTGGATACTTTGTAAAGGATTAC
ATTCATTTTGATCAAGTGTCTGGAAATCTTAAAACCACATCAATGAATGGGTCAATAGCA
TTTGGGTGCTCATCTAGTCAATCAGGAGAGCTAGGTTCATCTACTCAAGCAGTTGATGGA
ATAATTGGTTTTGGGCAAGCAAACTCATCCCTTATTTCGCAGCTAGCTGTATCTGGAAAG
GTGAAAAAAGTATTTGCACATTGCCTGGACGGCAGTAATGGTGGTGGCATATTTGCCATT
GGACAAGTAGTTCAGCCGAAAGTAAAGTCAACACCACTAGTCCCAAATGAGCCACATTAC
AATGTTGTCATGAAGGGAATTGAGGTTAATGGTAAAGCTCTTGACATTCCTACGACTATC
TTTGACGCGGGATCCAACAGAGGAACAATAATTGACAGCGGTACAACCTTAGCATATCTT
CCTAACAAGGTCTATAATGCTCTTATGGACAAGTTGATGGTTAAGCAACCAGATCTGCCA
ACTCATCTTGTTGAGGGGAGCTTCCACTGCTTTTACTACAGGGGAAAGGTTGATGATGGT
TTCCCAGTTGTAACCTTTCAGTTTGCTAGTTCTCTGTCTTTGACAGTTTATCCGCATGAT
TATCTTTTCCAAGTTAATGACAATGAATGGTGTATCGGTTGGCAGGACAGTGGAATGCAG
ACAAAGGATGGAAAGGAAATAACTCTGTTAGGAGATCTTGTGCTATCCAACAAGCTTGTT
CTGTATGATCTTGAAAATCAGAGTATTGGCTGGACTGAATATAACTGCTCTTCGAGCATC
AGAATCAGAGATGAAACTTCTGGAAAAGATTATACCATAGGTGCTCACAATATTTCATCA
GCTTCGACTTGCAATTCAAGAATGGTTTTTGCGTTCTTCGTATTAATCATCTCCATCCTA
TGCAATCTTTGA

Peptide Sequence

PEP ID

XP_016466802.1
PEP Infomation

PREDICTED: aspartic proteinase-like protein 2 [Nicotiana tabacum]
Sequence

MDLRRKGCLILLLVLVLVVNIVKGDNNVVFNVKHKYGGRGGSVLNELKAHDSRRHGRMLA
AVDFQLGGNGQPTDAALYYTKLTIGTPPKDYHVQVDTGSDILWVNCAGCRRCPSKSSLGI
DLTLYDLKASASGKTVSCDQDFCTDMFNAPYSDCRVGAPCEYQVTYGDGSSTSGYFVKDY
IHFDQVSGNLKTTSMNGSIAFGCSSSQSGELGSSTQAVDGIIGFGQANSSLISQLAVSGK
VKKVFAHCLDGSNGGGIFAIGQVVQPKVKSTPLVPNEPHYNVVMKGIEVNGKALDIPTTI
FDAGSNRGTIIDSGTTLAYLPNKVYNALMDKLMVKQPDLPTHLVEGSFHCFYYRGKVDDG
FPVVTFQFASSLSLTVYPHDYLFQVNDNEWCIGWQDSGMQTKDGKEITLLGDLVLSNKLV
LYDLENQSIGWTEYNCSSSIRIRDETSGKDYTIGAHNISSASTCNSRMVFAFFVLIISIL
CNL

Transcript Sequence

Gene sequence data has not been registered.